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lcgpbs job manager cancels all jobs
Full message
Example entries in /var/log/globus-gatekeeper.log:
Apr 20 21:07:42 ce05 gridinfo: [11413-12965] Submitted job 1208718397:lcgpbs:internal_2177507569:11193.1208718392 to batch system lcgpbs with ID 4151819.pbs01.pic.es Apr 20 21:10:39 ce05 gridinfo: [11413-11413] Job 1208718397:lcgpbs:internal_2177507569:11193.1208718392 added to DEQUEUE list Apr 20 21:10:39 ce05 gridinfo: [11413-19604] Job 1208718397:lcgpbs:internal_2177507569:11193.1208718392 (batch ID 4151819.pbs01.pic.es) REMOVED from batch system ok
Diagnosis
The /opt/globus/lib/perl/Globus/GRAM/JobManager/lcgpbs.pm code will cancel any job that is reported with 'W' status:
if(/Q|W|T/)
{
if ($status_line eq "W")
{
$self->cancel();
$state = Globus::GRAM::JobState::FAILED;
}
else
{
$state = Globus::GRAM::JobState::PENDING;
}
}
The reason for this behavior is that jobs submitted by "lcgpbs" should
never end up in the 'W' state, which signals a configuration
problem: a WN failed to stage in files from the CE via "scp".
See ssh problem from WN to CE.