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Difference between revisions of "EGI-InSPIRE:Finland-QR8"

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| Q8
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| NGI_FI
| NGI_FI  
| Finland
| Finland  
| Vera Hansper
| Vera Hansper
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Note: Complete the tables below by adding as many rows as needed. -->  
Note: Complete the tables below by adding as many rows as needed. -->  


=== 1.1. CONFERENCES/WORKSHOPS ORGANISED ===
=== 1.1. CONFERENCES/WORKSHOPS ORGANISED ===


{| cellspacing="0" border="1"
{| cellspacing="0" border="1"
|-
|-
! scope="col" | Date
! scope="col" | Date  
! Location
! Location  
! Title
! Title  
! Participants
! Participants  
! Outcome (Short report & Indico URL)
! Outcome (Short report & Indico URL)
|-
|-
|  
| <br>
|  
| <br>
|  
| <br>
|  
| <br>
|  
| <br>
|}
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=== 1.2. OTHER CONFERENCES/WORKSHOPS ATTENDED ===
=== 1.2. OTHER CONFERENCES/WORKSHOPS ATTENDED ===


{| cellspacing="0" border="1"
{| cellspacing="0" border="1"
|-
|-
! scope="col" | Date
! scope="col" | Date  
! Location
! Location  
! Title
! Title  
! Participants
! Participants  
! Outcome (Short report &amp; Indico URL)
! Outcome (Short report &amp; Indico URL)
|-
|-
| 26.03.2012 - 30.03.2012
| 27.03.2012 - 30.03.2012  
| Munich
| Munich  
| EGI Community Forum
| EGI Community Forum  
|  
|  
Per Öster
Per Öster  


Vera Hansper
Vera Hansper  


Pekka Manninen
Pekka Manninen  


Ulf Tigerstedt
Ulf Tigerstedt  


Kalle Happonen
Kalle Happonen  


Kimmo Mattila
Kimmo Mattila  


Johanna Lähti
Johanna Lähti  


Tapani Kinunen
Tapani Kinunen  


Pinja Koskinen
Pinja Koskinen  


|  
|  
CSC presented 3 talks, a poster and held a booth at the Forum. We felt that the booth was quite successful.
CSC presented 3 talks, a poster and held a booth at the Forum. We felt that the booth was quite successful.  


https://www.egi.eu/indico/conferenceDisplay.py?ovw=True&amp;confId=679
https://www.egi.eu/indico/conferenceDisplay.py?ovw=True&amp;confId=679  


|-
| 26.03.2012<br>
| Munich<br>
| OMB<br>
|
Vera Hansper
Ulf Tigerstedt<br>
| https://www.egi.eu/indico/conferenceDisplay.py?confId=800<br>
|-
| 26.03.2012<br>
| Munich<br>
| NGI International Liaison (NIL) Meeting
| Johanna Läh<br>
| https://www.egi.eu/indico/conferenceDisplay.py?confId=964
|}
|}


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{| cellspacing="0" cellpadding="2" border="1"
|-
|-
! scope="col" | Publication title
! scope="col" | Publication title  
! Journal / Proceedings title
! Journal / Proceedings title  
! align="left" | Journal references<br> ''Volume number<br> Issue<br><br>Pages from - to''
! align="left" | Journal references<br> ''Volume number<br> Issue<br><br>Pages from - to''  
! align="left" | Authors ''<br>1.<br>2.<br>3.<br>Et al?''
! align="left" | Authors ''<br>1.<br>2.<br>3.<br>Et al?''
|-
! scope="col" | Using ARC based grids for NGS read mapping - Grid interface for BWA.
! EMBNet.journal<br>
! align="left" | &nbsp;Accepted for publication<br>
! align="left" | Kimmo Mattila<br>
|}
|}


== 2. ACTIVITY REPORT == <!--''Note: just report activities relevant to this Quarter.''-->  
== 2. ACTIVITY REPORT == <!--''Note: just report activities relevant to this Quarter.''-->  


=== 2.1. Progress Summary ===
=== 2.1. Progress Summary ===


Following the successful installation and testing of the new hardware at the upcoming FGI (Finnish Grid Infrastructure) sites, the last few months have been spent in deploying software and setting up the sites for local and grid use.&nbsp; On the 25th of April,&nbsp; some grid jobs were successfully submitted, and the EGI certification of the Finnish sites has now begun in earnest.  
Following the successful installation and testing of the new hardware at the upcoming FGI (Finnish Grid Infrastructure) sites, the last few months have been spent in deploying software and setting up the sites for local and grid use.&nbsp; On the 25th of April,&nbsp; some grid jobs were successfully submitted, and the EGI certification of the Finnish sites has now begun in earnest.  


=== 2.2. Main Achievements ===
=== 2.2. Main Achievements ===


=== 2.3. Issues and mitigation ===
=== 2.3. Issues and mitigation ===


{| cellspacing="0" cellpadding="2" border="1"
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! scope="col" | Issue Description  
! scope="col" | Issue Description  
! scope="col" | Mitigation Description
! scope="col" | Mitigation Description
|-
! scope="col" |
Problem with EA effort as UMD releases fall behind EMI, which are behind NorduGrid releases
! scope="col" |
Production infra uses NorduGrid releases. We use EMI and maybe UMD only on testing hardware.
|}
|}


Latest revision as of 15:13, 9 January 2015

EGI Inspire Main page


Inspire reports menu: Home • SA1 weekly Reports • SA1 Task QR Reports • NGI QR Reports • NGI QR User support Reports



Quarterly Report Number NGI Name Partner Name Author
Q8 NGI_FI Finland Vera Hansper


1. MEETINGS AND DISSEMINATION

1.1. CONFERENCES/WORKSHOPS ORGANISED

Date Location Title Participants Outcome (Short report & Indico URL)





1.2. OTHER CONFERENCES/WORKSHOPS ATTENDED

Date Location Title Participants Outcome (Short report & Indico URL)
27.03.2012 - 30.03.2012 Munich EGI Community Forum

Per Öster

Vera Hansper

Pekka Manninen

Ulf Tigerstedt

Kalle Happonen

Kimmo Mattila

Johanna Lähti

Tapani Kinunen

Pinja Koskinen

CSC presented 3 talks, a poster and held a booth at the Forum. We felt that the booth was quite successful.

https://www.egi.eu/indico/conferenceDisplay.py?ovw=True&confId=679

26.03.2012
 Munich
 OMB

Vera Hansper

Ulf Tigerstedt

 https://www.egi.eu/indico/conferenceDisplay.py?confId=800
26.03.2012
 Munich
 NGI International Liaison (NIL) Meeting Johanna Läh
 https://www.egi.eu/indico/conferenceDisplay.py?confId=964


1.3. PUBLICATIONS

Publication title Journal / Proceedings title Journal references
Volume number
Issue

Pages from - to 		Authors
1.
2.
3.
Et al?
Using ARC based grids for NGS read mapping - Grid interface for BWA. EMBNet.journal
  Accepted for publication
 Kimmo Mattila

2. ACTIVITY REPORT

2.1. Progress Summary

Following the successful installation and testing of the new hardware at the upcoming FGI (Finnish Grid Infrastructure) sites, the last few months have been spent in deploying software and setting up the sites for local and grid use.  On the 25th of April,  some grid jobs were successfully submitted, and the EGI certification of the Finnish sites has now begun in earnest.

2.2. Main Achievements

2.3. Issues and mitigation

Issue Description Mitigation Description

Problem with EA effort as UMD releases fall behind EMI, which are behind NorduGrid releases

Production infra uses NorduGrid releases. We use EMI and maybe UMD only on testing hardware.


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