The wiki is deprecated and due to be decommissioned by the end of September 2022.
The content is being migrated to other supports, new updates will be ignored and lost.
If needed you can get in touch with EGI SDIS team using operations @ egi.eu.
Difference between revisions of "EGI-InSPIRE:Finland-QR7"
Jump to navigation
Jump to search
m |
|||
| (5 intermediate revisions by 2 users not shown) | |||
| Line 1: | Line 1: | ||
{{Template:EGI-Inspire menubar}} | |||
{{Template:Inspire_reports_menubar}} | |||
{{TOC_right}} | |||
{| cellspacing="0" cellpadding="2" border="1" | {| cellspacing="0" cellpadding="2" border="1" | ||
| Line 8: | Line 12: | ||
! scope="col" | Author | ! scope="col" | Author | ||
|- | |- | ||
| Q7 | | Q7 | ||
| NGI_FI | | NGI_FI | ||
| Finland | | Finland | ||
| Vera Hansper | | Vera Hansper | ||
|} | |} | ||
| Line 27: | Line 31: | ||
Note: Complete the tables below by adding as many rows as needed. --> | Note: Complete the tables below by adding as many rows as needed. --> | ||
=== 1.1. CONFERENCES/WORKSHOPS ORGANISED === | === 1.1. CONFERENCES/WORKSHOPS ORGANISED === | ||
{| cellspacing="0" border="1" | {| cellspacing="0" border="1" | ||
|- | |- | ||
! scope="col" | Date | ! scope="col" | Date | ||
! Location | ! Location | ||
! Title | ! Title | ||
! Participants | ! Participants | ||
! Outcome (Short report & Indico URL) | ! Outcome (Short report & Indico URL) | ||
|- | |- | ||
| Line 44: | Line 48: | ||
|} | |} | ||
=== 1.2. OTHER CONFERENCES/WORKSHOPS ATTENDED === | === 1.2. OTHER CONFERENCES/WORKSHOPS ATTENDED === | ||
{| cellspacing="0" border="1" | {| cellspacing="0" border="1" | ||
|- | |- | ||
! scope="col" | Date | ! scope="col" | Date | ||
! Location | ! Location | ||
! Title | ! Title | ||
! Participants | ! Participants | ||
! Outcome (Short report & Indico URL) | ! Outcome (Short report & Indico URL) | ||
|- | |- | ||
| 10.11.2011 | | 10.11.2011 | ||
| Amsterdam | | Amsterdam | ||
| NGI Liasons Kickoff Meeting | | NGI Liasons Kickoff Meeting | ||
| Vera Hansper | | Vera Hansper | ||
| | | https://www.egi.eu/indico/conferenceDisplay.py?confId=659 | ||
|- | |- | ||
| | | | ||
1.12.2011 | 1.12.2011 | ||
<br> | |||
| Amsterdam | |||
| Amsterdam | | EMI Infosys workshop | ||
| EMI Infosys workshop | |||
| | | | ||
Vera Hansper | Vera Hansper | ||
Ulf Tigerstedt | Ulf Tigerstedt | ||
| https://www.egi.eu/indico/conferenceDisplay.py?confId=654 | | https://www.egi.eu/indico/conferenceDisplay.py?confId=654 | ||
|- | |- | ||
| 24.01.2012 | |||
| Amsterdam | |||
| OMB F2F | |||
| | | | ||
Vera Hansper | |||
Vera Hansper | |||
Ulf Tigerstedt | Ulf Tigerstedt | ||
| | | https://www.egi.eu/indico/conferenceDisplay.py?confId=618 | ||
|- | |- | ||
| | | | ||
24.01.2012 - | |||
26.01.2012 | |||
| Amsterdam | |||
| EGI Sustainability Workshop | |||
| | | | ||
Vera Hansper | |||
Vera Hansper | |||
Per Öster | Per Öster | ||
| | | https://www.egi.eu/indico/conferenceDisplay.py?confId=709 | ||
|} | |} | ||
| Line 105: | Line 113: | ||
{| cellspacing="0" cellpadding="2" border="1" | {| cellspacing="0" cellpadding="2" border="1" | ||
|- | |- | ||
! scope="col" | Publication title | ! scope="col" | Publication title | ||
! Journal / Proceedings title | ! Journal / Proceedings title | ||
! align="left" | Journal references<br> ''Volume number<br> Issue<br><br>Pages from - to'' | ! align="left" | Journal references<br> ''Volume number<br> Issue<br><br>Pages from - to'' | ||
! align="left" | Authors ''<br>1.<br>2.<br>3.<br>Et al?'' | ! align="left" | Authors ''<br>1.<br>2.<br>3.<br>Et al?'' | ||
|- | |- | ||
! scope="col" | | ! scope="col" | | ||
! | Using ARC based grids for NGS read mapping - | ||
! align="left" | | Grid Interface for BWA | ||
! align="left" | | ! EMBnet.journal | ||
! align="left" | Submitted for publication | |||
! align="left" | Kimmo Mattila | |||
|} | |} | ||
== 2. ACTIVITY REPORT == <!--''Note: just report activities relevant to this Quarter.''--> | == 2. ACTIVITY REPORT == <!--''Note: just report activities relevant to this Quarter.''--> | ||
=== 2.1. Progress Summary === | === 2.1. Progress Summary === | ||
The Finnish National Grid has been successfully installed and has undergone acceptance tests. As there was a delay in the delivery of the hardware, the expected full deployment of the Grid is early in Q8, rather than in late Q7. Many meetings have been held with site administrators and security officers during this installation period. | |||
=== 2.2. Main Achievements === | |||
A major part of the national achievement in obtaining and installing the new FGI has been integrating the site administrators and security officers into the workings of EGI. | |||
=== 2.3. Issues and mitigation === | === 2.3. Issues and mitigation === | ||
{| cellspacing="0" cellpadding="2" border="1" | {| cellspacing="0" cellpadding="2" border="1" | ||
Latest revision as of 17:38, 6 January 2015
| EGI Inspire Main page |
| Inspire reports menu: | Home • | SA1 weekly Reports • | SA1 Task QR Reports • | NGI QR Reports • | NGI QR User support Reports |
| Quarterly Report Number | NGI Name | Partner Name | Author |
|---|---|---|---|
| Q7 | NGI_FI | Finland | Vera Hansper |
1. MEETINGS AND DISSEMINATION
1.1. CONFERENCES/WORKSHOPS ORGANISED
| Date | Location | Title | Participants | Outcome (Short report & Indico URL) |
|---|---|---|---|---|
1.2. OTHER CONFERENCES/WORKSHOPS ATTENDED
| Date | Location | Title | Participants | Outcome (Short report & Indico URL) |
|---|---|---|---|---|
| 10.11.2011 | Amsterdam | NGI Liasons Kickoff Meeting | Vera Hansper | https://www.egi.eu/indico/conferenceDisplay.py?confId=659 |
|
1.12.2011
|
Amsterdam | EMI Infosys workshop |
Vera Hansper Ulf Tigerstedt |
https://www.egi.eu/indico/conferenceDisplay.py?confId=654 |
| 24.01.2012 | Amsterdam | OMB F2F |
Vera Hansper Ulf Tigerstedt |
https://www.egi.eu/indico/conferenceDisplay.py?confId=618 |
|
24.01.2012 - 26.01.2012 |
Amsterdam | EGI Sustainability Workshop |
Vera Hansper Per Öster |
https://www.egi.eu/indico/conferenceDisplay.py?confId=709 |
1.3. PUBLICATIONS
| Publication title | Journal / Proceedings title | Journal references Volume number Issue Pages from - to |
Authors 1. 2. 3. Et al? |
|---|---|---|---|
|
Using ARC based grids for NGS read mapping - Grid Interface for BWA |
EMBnet.journal | Submitted for publication | Kimmo Mattila |
2. ACTIVITY REPORT
2.1. Progress Summary
The Finnish National Grid has been successfully installed and has undergone acceptance tests. As there was a delay in the delivery of the hardware, the expected full deployment of the Grid is early in Q8, rather than in late Q7. Many meetings have been held with site administrators and security officers during this installation period.
2.2. Main Achievements
A major part of the national achievement in obtaining and installing the new FGI has been integrating the site administrators and security officers into the workings of EGI.
2.3. Issues and mitigation
| Issue Description | Mitigation Description |
|---|