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Difference between revisions of "CBioPortal replication"
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(Created page with "== Description == Environment for managing clinical matabolomics data == Contacts == Christoph Steinbeck == Links == [http://www.ebi.ac.uk/about/news/press-releases/phenome...") |
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== Description == | == Description == | ||
Linking cBioPortal datasets into VM in EGI Fed Cloud for the EurOPDX community. | |||
== Contacts == | |||
Miroslav Ruda, Michal Prochazka | |||
== Links == | == Links == | ||
[http://europdx.eu/europdx-consortium/about-history-of-the-initiative.html] | |||
[http:// | [http://europdx.eu/europdx-consortium/objectives-of-the-consortium.html] | ||
== Resource requirements == | == Resource requirements == | ||
| Line 18: | Line 16: | ||
'''Computing requirements''' | '''Computing requirements''' | ||
* few computing nodes | |||
'''Storage requirements''' | '''Storage requirements''' | ||
* 20-30 TB ? | |||
* The storage site should act as a central data repository of EurOPDX community. | |||
* Backuping this data is probably needed. | |||
'''Software requirements''' | '''Software requirements''' | ||
* Tools creating the cBioPortal ( www.cbioportal.org ) | |||
'''Networking requirements''' | '''Networking requirements''' | ||
| Line 29: | Line 33: | ||
'''Other requirements''' | '''Other requirements''' | ||
== Materials and documents == | |||
== Other issues == | == Other issues == | ||
If this would be a common data collection site for the EurOPDX community, we should | |||
consider the sustainability of this service from the beginning. | |||
== == | |||
[[Competence_centre_ELIXIR]] | [[Competence_centre_ELIXIR]] | ||
Latest revision as of 14:58, 10 December 2015
Description
Linking cBioPortal datasets into VM in EGI Fed Cloud for the EurOPDX community.
Contacts
Miroslav Ruda, Michal Prochazka
Links
Resource requirements
Computing requirements
- few computing nodes
Storage requirements
- 20-30 TB ?
- The storage site should act as a central data repository of EurOPDX community.
- Backuping this data is probably needed.
Software requirements
- Tools creating the cBioPortal ( www.cbioportal.org )
Networking requirements
Authentication requirements
Other requirements
Materials and documents
Other issues
If this would be a common data collection site for the EurOPDX community, we should consider the sustainability of this service from the beginning.