Difference between revisions of "EGI-InSPIRE:Serbia-US-QR13"
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This report covers support activities to existing user communities, and belongs to EGI-InSPIRE SA1 (Task SA1.7 - Support Teams). The outreach to new communities activities that NGIs perform under NA2 are gathered through the Virtual Teams. However, there may be outreach activities that do outside of VTs. You can report about these in your 2.2.3 paragraph as well. | This report covers support activities to existing user communities, and belongs to EGI-InSPIRE SA1 (Task SA1.7 - Support Teams). The outreach to new communities activities that NGIs perform under NA2 are gathered through the Virtual Teams. However, there may be outreach activities that do outside of VTs. You can report about these in your 2.2.3 paragraph as well. | ||
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!scope="col"|Publication title||Journal / Proceedings title||align="left" |Journal references<br> ''Volume number<br> Issue<br><br>Pages from - to''||align="left" |Authors ''<br>1.<br>2.<br>3.<br>Et al?'' | !scope="col"|Publication title||Journal / Proceedings title||align="left" |Journal references<br> ''Volume number<br> Issue<br><br>Pages from - to''||align="left" |Authors ''<br>1.<br>2.<br>3.<br>Et al?'' | ||
|- | |- | ||
| Dipolar Bose-Einstein Condensates in Weak Anisotropic Disorder | |||
| Phys. Rev. A | |||
| 88 (2013) 013624 DOI: [http://dx.doi.org/10.1103/PhysRevA.88.013624 10.1103/PhysRevA.88.013624] | |||
| 1. B. Nikolic<br>2. A. Balaz<br>3. A. Pelster | |||
|- | |||
| Scaling Exponents and Phase Separation in a Nonlinear Network Model Inspired by the Gravitational Accretion | |||
| Physica D | |||
| 255 (2013) 52 DOI: [http://dx.doi.org/10.1016/j.physd.2013.04.004 10.1016/j.physd.2013.04.004] | |||
| 1. A. Bogojevic<br>2. A. Balaz<br>3. A. Belic | |||
|- | |||
| Nonadiabatic Molecular Dynamics Simulation for Carrier Transport in a Pentathiophene Butyric Acid Monolayer | |||
| Phys. Rev. B | |||
| 87 (2013) 205117 DOI: [http://dx.doi.org/10.1103/PhysRevB.87.205117 10.1103/PhysRevB.87.205117] | |||
| 1. J. Ren<br>2. N. Vukmirovic<br>3. L. W. Wang | |||
|} | |} | ||
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===2.1. User Support achievements=== | ===2.1. User Support achievements=== | ||
During Q13 the case study of a Serbian physicist Nenad Vukmirovic from the Institute of Physics Belgrade has been published on European Grid Infrastructure (EGI) web page (http://www.egi.eu/case-studies/eng_tech/semiconductor.html). His recent work, published in the Physical Review Letters, used NGI_AEGIS Grid computing resource to calculate how electrons interact with phonon waves. | |||
Together with the S��erbian chemistry community, we have deployed SZMAP (http://www.eyesopen.com/SZMAP) application over the NGI_AEGIS. This OpenEye's application aims to help researchers to understand the role of water in molecular interactions such as ligand binding. In addition, previously installed OpenEye's applications EON is updated to the latest versions. | |||
NGI_AEGIS Helpdesk (https://helpdesk.aegis.rs/) and NGI_AEGIS website (http://www.aegis.rs/) have been regularly maintained and updated in Q12. We have participated in testing of new GGUS releases and GGUS-NGI_AEGIS Helpdesk interface functionality. | |||
===2.2. Plans=== | ===2.2. Plans=== | ||
During Q14, NGI_AEGIS software stack will be extended with the Rosetta (https://www.rosettacommons.org/home) - software suite for modeling macromolecular structures. | |||
===2.3. Issues and mitigation=== | ===2.3. Issues and mitigation=== |
Latest revision as of 11:42, 23 January 2015
EGI Inspire Main page |
Inspire reports menu: | Home • | SA1 weekly Reports • | SA1 Task QR Reports • | NGI QR Reports • | NGI QR User support Reports |
Quarterly Report Number | NGI Name | Partner Name | Author |
---|---|---|---|
QR13 | NGI_AEGIS | Institute of Physics Belgrade | Dusan Vudragovic |
1. MEETINGS AND DISSEMINATION
1.1. CONFERENCES/WORKSHOPS ORGANISED
Date | Location | Title | Participants | Outcome (Short report & Indico URL) |
---|---|---|---|---|
1.3. PUBLICATIONS
Publication title | Journal / Proceedings title | Journal references Volume number Issue Pages from - to |
Authors 1. 2. 3. Et al? |
---|---|---|---|
Dipolar Bose-Einstein Condensates in Weak Anisotropic Disorder | Phys. Rev. A | 88 (2013) 013624 DOI: 10.1103/PhysRevA.88.013624 | 1. B. Nikolic 2. A. Balaz 3. A. Pelster |
Scaling Exponents and Phase Separation in a Nonlinear Network Model Inspired by the Gravitational Accretion | Physica D | 255 (2013) 52 DOI: 10.1016/j.physd.2013.04.004 | 1. A. Bogojevic 2. A. Balaz 3. A. Belic |
Nonadiabatic Molecular Dynamics Simulation for Carrier Transport in a Pentathiophene Butyric Acid Monolayer | Phys. Rev. B | 87 (2013) 205117 DOI: 10.1103/PhysRevB.87.205117 | 1. J. Ren 2. N. Vukmirovic 3. L. W. Wang |
2. ACTIVITY REPORT
2.1. User Support achievements
During Q13 the case study of a Serbian physicist Nenad Vukmirovic from the Institute of Physics Belgrade has been published on European Grid Infrastructure (EGI) web page (http://www.egi.eu/case-studies/eng_tech/semiconductor.html). His recent work, published in the Physical Review Letters, used NGI_AEGIS Grid computing resource to calculate how electrons interact with phonon waves.
Together with the S��erbian chemistry community, we have deployed SZMAP (http://www.eyesopen.com/SZMAP) application over the NGI_AEGIS. This OpenEye's application aims to help researchers to understand the role of water in molecular interactions such as ligand binding. In addition, previously installed OpenEye's applications EON is updated to the latest versions.
NGI_AEGIS Helpdesk (https://helpdesk.aegis.rs/) and NGI_AEGIS website (http://www.aegis.rs/) have been regularly maintained and updated in Q12. We have participated in testing of new GGUS releases and GGUS-NGI_AEGIS Helpdesk interface functionality.
2.2. Plans
During Q14, NGI_AEGIS software stack will be extended with the Rosetta (https://www.rosettacommons.org/home) - software suite for modeling macromolecular structures.
2.3. Issues and mitigation
Issue Description | Mitigation Description |
---|