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Difference between revisions of "EGI-InSPIRE:Finland-QR7"

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Using ARC based grids for NGS read mapping -
Using ARC based grids for NGS read mapping -  
 
Grid Interface for BWA  
Grid Interface for BWA
! EMBnet.journal  
 
! align="left" | Submitted for publication  
! EMBnet.journal
! align="left" | Submitted for publication
! align="left" | Kimmo Mattila
! align="left" | Kimmo Mattila
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=== 2.1. Progress Summary  ===
=== 2.1. Progress Summary  ===
The Finnish National Grid has been successfully installed and has undergone acceptance tests.  As there was a delay in the delivery of the hardware, the expected full deployment of the Grid is early in Q8, rather than in late Q7.  Many meetings have been held with site administrators and security officers during this installation period.


=== 2.2. Main Achievements  ===
=== 2.2. Main Achievements  ===
A major part of the national achievement in obtaining and installing the new FGI has been integrating the site administrators and security officers into the workings of EGI.


=== 2.3. Issues and mitigation  ===
=== 2.3. Issues and mitigation  ===

Revision as of 15:17, 6 February 2012


Quarterly Report Number NGI Name Partner Name Author
Q7 NGI_FI Finland Vera Hansper


1. MEETINGS AND DISSEMINATION

1.1. CONFERENCES/WORKSHOPS ORGANISED

Date Location Title Participants Outcome (Short report & Indico URL)

1.2. OTHER CONFERENCES/WORKSHOPS ATTENDED

Date Location Title Participants Outcome (Short report & Indico URL)
10.11.2011 Amsterdam NGI Liasons Kickoff Meeting Vera Hansper https://www.egi.eu/indico/conferenceDisplay.py?confId=659

1.12.2011


Amsterdam EMI Infosys workshop

Vera Hansper

Ulf Tigerstedt

https://www.egi.eu/indico/conferenceDisplay.py?confId=654
24.01.2012 Amsterdam OMB F2F

Vera Hansper

Ulf Tigerstedt

https://www.egi.eu/indico/conferenceDisplay.py?confId=618

24.01.2012 -

26.01.2012

Amsterdam EGI Sustainability Workshop

Vera Hansper

Per Öster

https://www.egi.eu/indico/conferenceDisplay.py?confId=709


1.3. PUBLICATIONS

Publication title Journal / Proceedings title Journal references
Volume number
Issue

Pages from - to
Authors
1.
2.
3.
Et al?

Using ARC based grids for NGS read mapping - Grid Interface for BWA

EMBnet.journal Submitted for publication Kimmo Mattila

2. ACTIVITY REPORT

2.1. Progress Summary

The Finnish National Grid has been successfully installed and has undergone acceptance tests.  As there was a delay in the delivery of the hardware, the expected full deployment of the Grid is early in Q8, rather than in late Q7.  Many meetings have been held with site administrators and security officers during this installation period.

2.2. Main Achievements

A major part of the national achievement in obtaining and installing the new FGI has been integrating the site administrators and security officers into the workings of EGI.

2.3. Issues and mitigation

Issue Description Mitigation Description