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Difference between revisions of "Chipster"
| Line 24: | Line 24: | ||
To access the Chipster tested, a valid account is needed. | To access the Chipster tested, a valid account is needed. | ||
* If | * If the user already HAS a valid user name and password for this Chipster service, he/she can launch the Chipster client from the [http://193.144.35.148:8081/chipster.jnlp Chipster] | ||
* If | * If the user did NOT use this Chipster server before or if username and password have expired, please use this [https://csgf.egi.eu/run-chipster link] to define a nickname and password for the Chipster server. | ||
** The password will be valid for one month. | |||
== How to create a temporary account == | == How to create a temporary account == | ||
Revision as of 12:35, 24 April 2017
| Overview | For users | For resource providers | Infrastructure status | Site-specific configuration | Architecture |
Accessing Chipster with CSG
Introduction
This guide is intended for researchers who want to use Chipster, is a user-friendly software for analyzing high-throughput data such as NGS and microarrays, in the cloud-based resources provided by EGI.
The Chipster server configured at CESGA offers:
- 4 vCPU cores,
- 16GB of RAM,
- 200GB in /data
- Software and tools (v3.11.2) are in /cvmfs/chipster.egi.eu/
This how-to has been tested in the EGI Applications on Demand Infrastructure.
The only pre-requisite to access and use the Chipster testbed is to be a member of this infrastructure.
Objectives
In this guide we will show how to
- Create a temporary Chipster account to access the testbed;
- Use the temporary account to access and run the bio-informatics applications.
How to access the Chipster testbed
To access the Chipster tested, a valid account is needed.
- If the user already HAS a valid user name and password for this Chipster service, he/she can launch the Chipster client from the Chipster
- If the user did NOT use this Chipster server before or if username and password have expired, please use this link to define a nickname and password for the Chipster server.
- The password will be valid for one month.