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| | #redirect[[Access_Chipster]] |
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| = Accessing Chipster with CSG =
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| == Introduction ==
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| This guide is intended for researchers who want to use [http://chipster.csc.fi/ Chipster], is a user-friendly software for analyzing high-throughput data such as NGS and microarrays, in the cloud-based resources provided by [https://wiki.egi.eu/wiki/Long-tail_of_science EGI].
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| The Chipster server configured at [https://appdb.egi.eu/store/site/cesga CESGA] offers:
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| * 4 vCPU cores,
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| * 16GB of RAM,
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| * 200GB in /data
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| * Software and tools (v3.11.2) are in /cvmfs/chipster.egi.eu/
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| This how-to has been tested in the [https://access.egi.eu/ EGI Applications on Demand Infrastructure].
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| The only pre-requisite to access and use the Chipster testbed is to be a member of this infrastructure.
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| == Objectives ==
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| In this guide we will show how to
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| * Create a temporary Chipster account to access the testbed;
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| * Use the temporary account to access and run the bio-informatics applications.
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| == How to access the Chipster testbed ==
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| To access the Chipster tested, a valid account is needed.
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| * If you already HAVE a valid user name and password for this Chipster service, you can launch the Chipster client from the [http://193.144.35.148:8081/chipster.jnlp Chipster]
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| * If you HAVE NOT used this Chipster server before or your password has expired, please use this [https://csgf.egi.eu/run-chipster link] to define a nickname and password for the Chipster server. The password will be valid for one month.
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| == How to create a temporary account ==
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The wiki is deprecated and due to be decommissioned by the end of September 2022.